IL_2O45_034

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GAGCACU*AAACUCC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|G|875
2O45|1|A|A|876
2O45|1|A|G|877
2O45|1|A|C|878
2O45|1|A|A|879
2O45|1|A|C|880
2O45|1|A|U|881
*
2O45|1|A|A|921
2O45|1|A|A|922
2O45|1|A|A|923
2O45|1|A|C|924
2O45|1|A|U|925
2O45|1|A|C|926
2O45|1|A|C|927

Current chains

Chain A

23S rRNA

Nearby chains