IL_2O45_065

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGCUCAAG*CUCAGACG

Length

16 nucleotides

Bulged bases

2O45|1|A|C|1489

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|C|1487
2O45|1|A|G|1488
2O45|1|A|C|1489
2O45|1|A|U|1490
2O45|1|A|C|1491
2O45|1|A|A|1492
2O45|1|A|A|1493
2O45|1|A|G|1494
*
2O45|1|A|C|1529
2O45|1|A|U|1530
2O45|1|A|C|1531
2O45|1|A|A|1532
2O45|1|A|G|1533
2O45|1|A|A|1534
2O45|1|A|C|1535
2O45|1|A|G|1536

Current chains

Chain A

23S rRNA

Nearby chains