IL_2O45_088

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UUCGGGUUUC*GAAACUUGGA

Length

20 nucleotides

Bulged bases

2O45|1|A|A|2168

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|U|2080
2O45|1|A|U|2081
2O45|1|A|C|2082
2O45|1|A|G|2083
2O45|1|A|G|2084
2O45|1|A|G|2085
2O45|1|A|U|2086
2O45|1|A|U|2087
2O45|1|A|U|2088
2O45|1|A|C|2089
*
2O45|1|A|G|2166
2O45|1|A|A|2167
2O45|1|A|A|2168
2O45|1|A|A|2169
2O45|1|A|C|2170
2O45|1|A|U|2171
2O45|1|A|U|2172
2O45|1|A|G|2173
2O45|1|A|G|2174
2O45|1|A|A|2175

Current chains

Chain A

23S rRNA

Nearby chains