IL_2O45_114

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GUGCACG*UUCAGC

Length

13 nucleotides

Bulged bases

2O45|1|A|C|2842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|G|2821
2O45|1|A|U|2822
2O45|1|A|G|2823
2O45|1|A|C|2824
2O45|1|A|A|2825
2O45|1|A|C|2826
2O45|1|A|G|2827
*
2O45|1|A|U|2840
2O45|1|A|U|2841
2O45|1|A|C|2842
2O45|1|A|A|2843
2O45|1|A|G|2844
2O45|1|A|C|2845

Current chains

Chain A

23S rRNA

Nearby chains