IL_2O45_126

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UGGAGUGAUGG*UCUAAACGUUGAAA

Length

25 nucleotides

Bulged bases

2O45|1|A|A|1429

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|U|1426
2O45|1|A|G|1427
2O45|1|A|G|1428
2O45|1|A|A|1429
2O45|1|A|G|1430
2O45|1|A|U|1431
2O45|1|A|G|1432
2O45|1|A|A|1433
2O45|1|A|U|1434
2O45|1|A|G|1435
2O45|1|A|G|1436
*
2O45|1|A|U|1592
2O45|1|A|C|1593
2O45|1|A|U|1594
2O45|1|A|A|1595
2O45|1|A|A|1596
2O45|1|A|A|1597
2O45|1|A|C|1598
2O45|1|A|G|1599
2O45|1|A|U|1600
2O45|1|A|U|1601
2O45|1|A|G|1602
2O45|1|A|A|1603
2O45|1|A|A|1604
2O45|1|A|A|1605

Current chains

Chain A

23S rRNA

Nearby chains