IL_2O45_127

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGGACG*CCAAGAAAAGC

Length

17 nucleotides

Bulged bases

2O45|1|A|C|1442, 2O45|1|A|A|1582

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|G|1438
2O45|1|A|G|1439
2O45|1|A|G|1440
2O45|1|A|A|1441
2O45|1|A|C|1442
2O45|1|A|G|1443
*
2O45|1|A|C|1580
2O45|1|A|C|1581
2O45|1|A|A|1582
2O45|1|A|A|1583
2O45|1|A|G|1584
2O45|1|A|A|1585
2O45|1|A|A|1586
2O45|1|A|A|1587
2O45|1|A|A|1588
2O45|1|A|G|1589
2O45|1|A|C|1590

Current chains

Chain A

23S rRNA

Nearby chains