IL_2O45_133

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GUCAAGUGGAG*CGAAAUGAAGC

Length

22 nucleotides

Bulged bases

2O45|1|A|C|1844, 2O45|1|A|A|1851

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|G|1842
2O45|1|A|U|1843
2O45|1|A|C|1844
2O45|1|A|A|1845
2O45|1|A|A|1846
2O45|1|A|G|1847
2O45|1|A|U|1848
2O45|1|A|G|1849
2O45|1|A|G|1850
2O45|1|A|A|1851
2O45|1|A|G|1852
*
2O45|1|A|C|1865
2O45|1|A|G|1866
2O45|1|A|A|1867
2O45|1|A|A|1868
2O45|1|A|A|1869
2O45|1|A|U|1870
2O45|1|A|G|1871
2O45|1|A|A|1872
2O45|1|A|A|1873
2O45|1|A|G|1874
2O45|1|A|C|1875

Current chains

Chain A

23S rRNA

Nearby chains