IL_2PWT_004

3D structure

PDB id

2PWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosomal decoding site complexed with aminoglycoside containing the L-HABA group

Experimental method

X-RAY DIFFRACTION

Resolution

1.8 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_89407.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

267

Unit IDs

2PWT|1|A|G|18
2PWT|1|A|U|19
2PWT|1|A|C|20
*
2PWT|1|B|G|26
2PWT|1|B|U|27
2PWT|1|B|C|28

Current chains

Chain A

22-mer of the ribosomal decoding site

Chain B

22-mer of the ribosomal decoding site

Nearby chains