IL_2PXT_001

3D structure

PDB id

2PXT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Variant 15 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

UACCAG*CAA

Length

9 nucleotides

Bulged bases

2PXT|1|B|A|143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2PXT_001 not in the Motif Atlas

Geometric match to IL_3LQX_001

Geometric discrepancy: 0.0946

The information below is about IL_3LQX_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_59302.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

2

Unit IDs

2PXT|1|B|U|139
2PXT|1|B|A|140
2PXT|1|B|C|141
2PXT|1|B|C|142
2PXT|1|B|A|143
2PXT|1|B|G|144
*
2PXT|1|B|C|167
2PXT|1|B|A|168
2PXT|1|B|A|169

Current chains

Chain B

4.5 S RNA

Nearby chains

Chain A

Signal recognition particle protein