IL_2QKK_005

3D structure

PDB id

2QKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human RNase H catalytic domain mutant D210N in complex with 14-mer RNA/DNA hybrid

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CAC*GTG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2QKK|1|G|C|4
2QKK|1|G|A|5
2QKK|1|G|C|6
*
2QKK|1|H|DG|23
2QKK|1|H|DT|24
2QKK|1|H|DG|25

Current chains

Chain G

5'-R(*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*C)-3'

Chain H

5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*G)-3'

Nearby chains

Chain A

Ribonuclease H1

Chain E

Ribonuclease H1

Chain F

Ribonuclease H1