IL_2UXC_041
3D structure
- PDB id
- 2UXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 2UXC|1|A|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2UXC_041 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.0909
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
2UXC|1|A|U|1052
2UXC|1|A|G|1053
2UXC|1|A|C|1054
2UXC|1|A|A|1055
2UXC|1|A|U|1056
*
2UXC|1|A|A|1204
2UXC|1|A|U|1205
2UXC|1|A|G|1206
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain C
- RIBOSOMAL PROTEIN S3
- Chain J
- RIBOSOMAL PROTEIN S10
- Chain N
- RIBOSOMAL PROTEIN S14
- Chain X
- A-SITE MESSENGER RNA FRAGMENT CGGG
- Chain Y
- ANTICODON STEM-LOOP OF TRANSFER RNA WITH ANTICODON ACGA
Coloring options: