IL_2UXC_062
3D structure
- PDB id
- 2UXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAGGAAGAAGCCC*GGGUGUAAACUC
- Length
- 25 nucleotides
- Bulged bases
- 2UXC|1|A|A|414, 2UXC|1|A|A|415, 2UXC|1|A|A|432, 2UXC|1|A|C|433, 2UXC|1|A|U|434
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2UXC|1|A|G|407
2UXC|1|A|A|408
2UXC|1|A|G|409
2UXC|1|A|G|410
2UXC|1|A|A|411
2UXC|1|A|A|412
2UXC|1|A|G|413
2UXC|1|A|A|414
2UXC|1|A|A|415
2UXC|1|A|G|416
2UXC|1|A|C|417
2UXC|1|A|C|418
2UXC|1|A|C|419
*
2UXC|1|A|G|424
2UXC|1|A|G|425
2UXC|1|A|G|426
2UXC|1|A|U|427
2UXC|1|A|G|428
2UXC|1|A|U|429
2UXC|1|A|A|430
2UXC|1|A|A|431
2UXC|1|A|A|432
2UXC|1|A|C|433
2UXC|1|A|U|434
2UXC|1|A|C|435
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain D
- RIBOSOMAL PROTEIN S4
- Chain L
- RIBOSOMAL PROTEIN S12
Coloring options: