IL_2UXD_061

3D structure

PDB id

2UXD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA CGGG in the context of the Thermus thermophilus 30S subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GAGGAAGAAGC*GUGUAAACUC

Length

21 nucleotides

Bulged bases

2UXD|1|A|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2UXD|1|A|G|407
2UXD|1|A|A|408
2UXD|1|A|G|409
2UXD|1|A|G|410
2UXD|1|A|A|411
2UXD|1|A|A|412
2UXD|1|A|G|413
2UXD|1|A|A|414
2UXD|1|A|A|415
2UXD|1|A|G|416
2UXD|1|A|C|417
*
2UXD|1|A|G|426
2UXD|1|A|U|427
2UXD|1|A|G|428
2UXD|1|A|U|429
2UXD|1|A|A|430
2UXD|1|A|A|431
2UXD|1|A|A|432
2UXD|1|A|C|433
2UXD|1|A|U|434
2UXD|1|A|C|435

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain D

RIBOSOMAL PROTEIN S4

Chain G

RIBOSOMAL PROTEIN S7