IL_2VQF_044
3D structure
- PDB id
- 2VQF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUGCCAGC*GGGCACUC
- Length
- 17 nucleotides
- Bulged bases
- 2VQF|1|A|U|1125
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2VQF|1|A|G|1124
2VQF|1|A|U|1125
2VQF|1|A|U|1126
2VQF|1|A|G|1127
2VQF|1|A|C|1128
2VQF|1|A|C|1129
2VQF|1|A|A|1130
2VQF|1|A|G|1131
2VQF|1|A|C|1132
*
2VQF|1|A|G|1142
2VQF|1|A|G|1143
2VQF|1|A|G|1144
2VQF|1|A|C|1145
2VQF|1|A|A|1146
2VQF|1|A|C|1147
2VQF|1|A|U|1148
2VQF|1|A|C|1149
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain J
- 30S RIBOSOMAL PROTEIN S10
Coloring options: