IL_2WWB_002

3D structure

PDB id

2WWB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

6.48 Å

Loop

Sequence

UGUGAA*UUCCGUGAAUCA

Length

18 nucleotides

Bulged bases

2WWB|1|D|C|84, 2WWB|1|D|G|85, 2WWB|1|D|U|86

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2WWB|1|D|U|67
2WWB|1|D|G|68
2WWB|1|D|U|69
2WWB|1|D|G|70
2WWB|1|D|A|71
2WWB|1|D|A|72
*
2WWB|1|D|U|81
2WWB|1|D|U|82
2WWB|1|D|C|83
2WWB|1|D|C|84
2WWB|1|D|G|85
2WWB|1|D|U|86
2WWB|1|D|G|87
2WWB|1|D|A|88
2WWB|1|D|A|89
2WWB|1|D|U|90
2WWB|1|D|C|91
2WWB|1|D|A|92

Current chains

Chain D

5.8S RRNA

Nearby chains

Chain B

PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA

Chain L

60S RIBOSOMAL PROTEIN L26-A

Chain N

60S RIBOSOMAL PROTEIN L35