IL_2XZM_052

3D structure

PDB id

2XZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GGAU*GCAC

Length

8 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_41766.3

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

49

Unit IDs

2XZM|1|A|G|1019
2XZM|1|A|G|1020
2XZM|1|A|A|1021
2XZM|1|A|U|1022
*
2XZM|1|A|G|1046
2XZM|1|A|C|1047
2XZM|1|A|A|1048
2XZM|1|A|C|1049

Current chains

Chain A

18S RRNA

Nearby chains

Chain 4

40S RIBOSOMAL PROTEIN S3A

Chain 5

RIBOSOMAL PROTEIN S26E CONTAINING PROTEIN

Chain B

RPS0E

Chain O

RPS13E