IL_2XZM_059

3D structure

PDB id

2XZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

ACA*UCCCU

Length

8 nucleotides

Bulged bases

2XZM|1|A|C|1131

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73276.3

Basepair signature

cWW-tSW-tWH-cSH-cWS-cWW

Number of instances in this motif group

21

Unit IDs

2XZM|1|A|A|1130
2XZM|1|A|C|1131
2XZM|1|A|A|1132
*
2XZM|1|A|U|1589
2XZM|1|A|C|1590
2XZM|1|A|C|1591
2XZM|1|A|C|1592
2XZM|1|A|U|1593

Current chains

Chain A

18S RRNA

Nearby chains

Chain 1

RIBOSOMAL PROTEIN S28E CONTAINING PROTEIN

Chain 5

RIBOSOMAL PROTEIN S26E CONTAINING PROTEIN

Chain G

RIBOSOMAL PROTEIN S7 CONTAINING PROTEIN

Chain I

RPS16E