IL_2XZM_067

3D structure

PDB id

2XZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

UGG*UCUGUGA

Length

10 nucleotides

Bulged bases

2XZM|1|A|C|1402, 2XZM|1|A|U|1403, 2XZM|1|A|G|1406

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54420.1

Basepair signature

cWW-R-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

2XZM|1|A|U|1248
2XZM|1|A|G|1249
2XZM|1|A|G|1250
*
2XZM|1|A|U|1401
2XZM|1|A|C|1402
2XZM|1|A|U|1403
2XZM|1|A|G|1404
2XZM|1|A|U|1405
2XZM|1|A|G|1406
2XZM|1|A|A|1407

Current chains

Chain A

18S RRNA

Nearby chains

Chain 7

PLECTIN/S10 DOMAIN CONTAINING PROTEIN

Chain 9

RPS31E

Chain C

KH DOMAIN CONTAINING PROTEIN

Chain J

RIBOSOMAL PROTEIN S10 CONTAINING PROTEIN

Chain N

RPS29E