IL_2XZM_077

3D structure

PDB id

2XZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GUAUUUC*GUAAUC

Length

13 nucleotides

Bulged bases

2XZM|1|A|U|1463, 2XZM|1|A|U|1464, 2XZM|1|A|A|1488, 2XZM|1|A|U|1489

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02690.1

Basepair signature

cWW-tSS-L-cSS-R-L-L-L-L-cWW

Number of instances in this motif group

1

Unit IDs

2XZM|1|A|G|1459
2XZM|1|A|U|1460
2XZM|1|A|A|1461
2XZM|1|A|U|1462
2XZM|1|A|U|1463
2XZM|1|A|U|1464
2XZM|1|A|C|1465
*
2XZM|1|A|G|1485
2XZM|1|A|U|1486
2XZM|1|A|A|1487
2XZM|1|A|A|1488
2XZM|1|A|U|1489
2XZM|1|A|C|1490

Current chains

Chain A

18S RRNA

Nearby chains

Chain C

KH DOMAIN CONTAINING PROTEIN

Chain J

RIBOSOMAL PROTEIN S10 CONTAINING PROTEIN

Chain N

RPS29E

Chain T

RPS19E