IL_2XZM_087

3D structure

PDB id

2XZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

UAGUAAC*GGAACAA

Length

14 nucleotides

Bulged bases

2XZM|1|A|A|1699

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12486.1

Basepair signature

cWW-cWW-L-R-R-R-L-L-cWW-cWW

Number of instances in this motif group

1

Unit IDs

2XZM|1|A|U|1622
2XZM|1|A|A|1623
2XZM|1|A|G|1624
2XZM|1|A|U|1625
2XZM|1|A|A|1626
2XZM|1|A|A|1627
2XZM|1|A|C|1628
*
2XZM|1|A|G|1697
2XZM|1|A|G|1698
2XZM|1|A|A|1699
2XZM|1|A|A|1700
2XZM|1|A|C|1701
2XZM|1|A|A|1702
2XZM|1|A|A|1703

Current chains

Chain A

18S RRNA

Nearby chains

Chain L

40S RIBOSOMAL PROTEIN S12