IL_2ZJP_076
3D structure
- PDB id
- 2ZJP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- ACGA*UCUAU
- Length
- 9 nucleotides
- Bulged bases
- 2ZJP|1|X|C|2038
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2ZJP_076 not in the Motif Atlas
- Homologous match to IL_7A0S_074
- Geometric discrepancy: 0.2925
- The information below is about IL_7A0S_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70335.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
2ZJP|1|X|A|2037
2ZJP|1|X|C|2038
2ZJP|1|X|G|2039
2ZJP|1|X|A|2040
*
2ZJP|1|X|U|2590
2ZJP|1|X|C|2591
2ZJP|1|X|U|2592
2ZJP|1|X|A|2593
2ZJP|1|X|U|2594
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain B
- 50S RIBOSOMAL PROTEIN L3
- Chain P
- 50S RIBOSOMAL PROTEIN L22
- Chain Y
- 50S RIBOSOMAL PROTEIN L32
Coloring options: