IL_2ZJR_111
3D structure
- PDB id
- 2ZJR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.91 Å
Loop
- Sequence
- AUCA*UAU
- Length
- 7 nucleotides
- Bulged bases
- 2ZJR|1|X|C|1006
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2ZJR_111 not in the Motif Atlas
- Geometric match to IL_7A0S_078
- Geometric discrepancy: 0.2872
- The information below is about IL_7A0S_078
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
2ZJR|1|X|A|1004
2ZJR|1|X|U|1005
2ZJR|1|X|C|1006
2ZJR|1|X|A|1007
*
2ZJR|1|X|U|1170
2ZJR|1|X|A|1171
2ZJR|1|X|U|1172
Current chains
- Chain X
- ribosomal 23S RNA
Nearby chains
- Chain G
- 50S ribosomal protein L13
- Chain N
- 50S ribosomal protein L20
- Chain O
- 50S ribosomal protein L21
- Chain W
- 50S ribosomal protein L30
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