IL_2ZM6_054

3D structure

PDB id

2ZM6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2ZM6_054 not in the Motif Atlas

Geometric match to IL_6E7L_001

Geometric discrepancy: 0.1665

The information below is about IL_6E7L_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_68118.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

29

Unit IDs

2ZM6|1|A|G|1405
2ZM6|1|A|U|1406
2ZM6|1|A|C|1407
*
2ZM6|1|A|G|1494
2ZM6|1|A|U|1495
2ZM6|1|A|C|1496

Current chains

Chain A

16S ribosomal RNA

Nearby chains