IL_30QZ_077

3D structure

PDB id

30QZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

30QZ|1|a|C|2055, 30QZ|1|a|U|2613, 30QZ|1|a|A|2614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_30QZ_077 not in the Motif Atlas

Geometric match to IL_8B0X_140

Geometric discrepancy: 0.0406

The information below is about IL_8B0X_140

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80025.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

9

Unit IDs

30QZ|1|a|A|2054
30QZ|1|a|C|2055
30QZ|1|a|G|2056
*
30QZ|1|a|C|2612
30QZ|1|a|U|2613
30QZ|1|a|A|2614
30QZ|1|a|U|2615

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain r

Large ribosomal subunit protein uL22

Chain z

Large ribosomal subunit protein bL32