IL_30RA_076
3D structure
- PDB id
- 30RA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_30RA_076 not in the Motif Atlas
- Geometric match to IL_8B0X_076
- Geometric discrepancy: 0.0466
- The information below is about IL_8B0X_076
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.4
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 45
Unit IDs
30RA|1|a|G|536
30RA|1|a|G|537
30RA|1|a|A|538
30RA|1|a|G|539
*
30RA|1|a|U|554
30RA|1|a|G|555
30RA|1|a|A|556
30RA|1|a|C|557
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain i
- Large ribosomal subunit protein uL13
- Chain p
- Large ribosomal subunit protein bL20
Coloring options: