IL_30RA_138

3D structure

PDB id

30RA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GC*GCAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_30RA_138 not in the Motif Atlas

Geometric match to IL_9DFE_076

Geometric discrepancy: 0.055

The information below is about IL_9DFE_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24886.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

13

Unit IDs

30RA|1|a|G|1933
30RA|1|a|C|1934
*
30RA|1|a|G|1964
30RA|1|a|C|1965
30RA|1|a|A|1966
30RA|1|a|C|1967

Current chains

Chain a

23S rRNA

Nearby chains