IL_30RB_021

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CG*C(G7M)CGGUAAUACGGAGG

Length

18 nucleotides

Bulged bases

30RB|1|A|G|530, 30RB|1|A|U|531, 30RB|1|A|A|532, 30RB|1|A|U|534

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RB|1|A|C|504
30RB|1|A|G|505
*
30RB|1|A|C|526
30RB|1|A|G7M|527
30RB|1|A|C|528
30RB|1|A|G|529
30RB|1|A|G|530
30RB|1|A|U|531
30RB|1|A|A|532
30RB|1|A|A|533
30RB|1|A|U|534
30RB|1|A|A|535
30RB|1|A|C|536
30RB|1|A|G|537
30RB|1|A|G|538
30RB|1|A|A|539
30RB|1|A|G|540
30RB|1|A|G|541

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

Small ribosomal subunit protein uS3

Chain D

Small ribosomal subunit protein uS4

Chain L

Small ribosomal subunit protein uS12