IL_3BNO_010
3D structure
- PDB id
- 3BNO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (Br-derivative)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.35 Å
Loop
- Sequence
- AACAAG*CACC(5BU)
- Length
- 11 nucleotides
- Bulged bases
- 3BNO|1|A|A|16
- QA status
- Modified nucleotides: 5BU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3BNO_010 not in the Motif Atlas
- Geometric match to IL_3BNN_007
- Geometric discrepancy: 0.12
- The information below is about IL_3BNN_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25186.4
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
3BNO|1|A|A|12
3BNO|1|A|A|13
3BNO|1|A|C|14
3BNO|1|A|A|15
3BNO|1|A|A|16
3BNO|1|A|G|17
*
3BNO|1|B|C|5
3BNO|1|B|A|6
3BNO|1|B|C|7
3BNO|1|B|C|8
3BNO|1|B|5BU|9
Current chains
- Chain A
- A site of human mitochondrial ribosome
- Chain B
- A site of human mitochondrial ribosome
Nearby chains
- Chain C
- A site of human mitochondrial ribosome
Coloring options: