IL_3BNR_004
3D structure
- PDB id
- 3BNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the presence of nonspecifically bound paromomycin (A1555G mutant, Br-derivative)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.1 Å
Loop
- Sequence
- GAG*C(5BU)C
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3BNR_004 not in the Motif Atlas
- Geometric match to IL_4E48_005
- Geometric discrepancy: 0.1476
- The information below is about IL_4E48_005
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
3BNR|1|A|G|13
3BNR|1|A|A|14
3BNR|1|A|G|15
*
3BNR|1|B|C|9
3BNR|1|B|5BU|10
3BNR|1|B|C|11
Current chains
- Chain A
- A site of human mitochondrial ribosome, chain one
- Chain B
- A site of human mitochondrial ribosome, chain two
Nearby chains
- Chain C
- A site of human mitochondrial ribosome, chain one
- Chain D
- A site of human mitochondrial ribosome, chain three
Coloring options: