IL_3CC2_055
3D structure
- PDB id
- 3CC2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- CGAAC*GCAUAG
- Length
- 11 nucleotides
- Bulged bases
- 3CC2|1|0|U|1625
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CC2_055 not in the Motif Atlas
- Homologous match to IL_4V9F_056
- Geometric discrepancy: 0.0662
- The information below is about IL_4V9F_056
- Detailed Annotation
- tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_62654.1
- Basepair signature
- cWW-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
3CC2|1|0|C|1570
3CC2|1|0|G|1571
3CC2|1|0|A|1572
3CC2|1|0|A|1573
3CC2|1|0|C|1574
*
3CC2|1|0|G|1622
3CC2|1|0|C|1623
3CC2|1|0|A|1624
3CC2|1|0|U|1625
3CC2|1|0|A|1626
3CC2|1|0|G|1627
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: