IL_3CC2_105
3D structure
- PDB id
- 3CC2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- CGAAG*CAAUGUG
- Length
- 12 nucleotides
- Bulged bases
- 3CC2|1|0|U|263
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CC2_105 not in the Motif Atlas
- Homologous match to IL_4V9F_108
- Geometric discrepancy: 0.021
- The information below is about IL_4V9F_108
- Detailed Annotation
- Kink-turn with embedded cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_33886.1
- Basepair signature
- cWW-L-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
3CC2|1|0|C|245
3CC2|1|0|G|246
3CC2|1|0|A|247
3CC2|1|0|A|248
3CC2|1|0|G|249
*
3CC2|1|0|C|260
3CC2|1|0|A|261
3CC2|1|0|A|262
3CC2|1|0|U|263
3CC2|1|0|G|264
3CC2|1|0|U|265
3CC2|1|0|G|266
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain F
- 50S ribosomal protein L7Ae
- Chain M
- 50S ribosomal protein L15e
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