IL_3CC4_084

3D structure

PDB id

3CC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CG*UGG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CC4_084 not in the Motif Atlas

Homologous match to IL_4V9F_086

Geometric discrepancy: 0.0423

The information below is about IL_4V9F_086

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_07039.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

16

Unit IDs

3CC4|1|0|C|2542
3CC4|1|0|G|2543
*
3CC4|1|0|U|2615
3CC4|1|0|G|2616
3CC4|1|0|G|2617

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L3P