3D structure

PDB id
3CC4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
UGUAC*GGUAG
Length
10 nucleotides
Bulged bases
3CC4|1|0|U|2726
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3CC4_092 not in the Motif Atlas
Homologous match to IL_4V9F_094
Geometric discrepancy: 0.0457
The information below is about IL_4V9F_094
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_23774.1
Basepair signature
cWW-L-R-L-tHS-cWW
Number of instances in this motif group
11

Unit IDs

3CC4|1|0|U|2724
3CC4|1|0|G|2725
3CC4|1|0|U|2726
3CC4|1|0|A|2727
3CC4|1|0|C|2728
*
3CC4|1|0|G|2754
3CC4|1|0|G|2755
3CC4|1|0|U|2756
3CC4|1|0|A|2757
3CC4|1|0|G|2758

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain B
50S ribosomal protein L3P
Chain U
50S ribosomal protein L24e
Chain X
50S ribosomal protein L31e

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2377 s