IL_3CC7_073

3D structure

PDB id

3CC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2487U

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

AUG*CU

Length

5 nucleotides

Bulged bases

3CC7|1|0|U|2109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CC7_073 not in the Motif Atlas

Homologous match to IL_4V9F_074

Geometric discrepancy: 0.0516

The information below is about IL_4V9F_074

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

3CC7|1|0|A|2108
3CC7|1|0|U|2109
3CC7|1|0|G|2110
*
3CC7|1|0|C|2477
3CC7|1|0|U|2478

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L4P

Chain L

50S ribosomal protein L15P