IL_3CCE_055

3D structure

PDB id

3CCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

CGAAC*GCAUAG

Length

11 nucleotides

Bulged bases

3CCE|1|0|U|1625

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCE_055 not in the Motif Atlas

Homologous match to IL_4V9F_056

Geometric discrepancy: 0.0983

The information below is about IL_4V9F_056

Detailed Annotation

tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_62654.1

Basepair signature

cWW-tSH-tHH-tHS-cWW

Number of instances in this motif group

1

Unit IDs

3CCE|1|0|C|1570
3CCE|1|0|G|1571
3CCE|1|0|A|1572
3CCE|1|0|A|1573
3CCE|1|0|C|1574
*
3CCE|1|0|G|1622
3CCE|1|0|C|1623
3CCE|1|0|A|1624
3CCE|1|0|U|1625
3CCE|1|0|A|1626
3CCE|1|0|G|1627

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains