IL_3CCJ_011

3D structure

PDB id

3CCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUCUCAUC*GUGCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCJ_011 not in the Motif Atlas

Homologous match to IL_4V9F_011

Geometric discrepancy: 0.4547

The information below is about IL_4V9F_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22028.1

Basepair signature

cWW-L-R-L-R-L-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

3CCJ|1|0|C|280
3CCJ|1|0|U|281
3CCJ|1|0|C|282
3CCJ|1|0|U|283
3CCJ|1|0|C|284
3CCJ|1|0|A|285
3CCJ|1|0|U|286
3CCJ|1|0|C|287
*
3CCJ|1|0|G|365
3CCJ|1|0|U|366
3CCJ|1|0|G|367
3CCJ|1|0|C|368
3CCJ|1|0|G|369

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain M

50S ribosomal protein L15e