IL_3CCQ_011

3D structure

PDB id

3CCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUCUCAUC*GUGCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCQ_011 not in the Motif Atlas

Homologous match to IL_4V9F_011

Geometric discrepancy: 0.4375

The information below is about IL_4V9F_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

3CCQ|1|0|C|280
3CCQ|1|0|U|281
3CCQ|1|0|C|282
3CCQ|1|0|U|283
3CCQ|1|0|C|284
3CCQ|1|0|A|285
3CCQ|1|0|U|286
3CCQ|1|0|C|287
*
3CCQ|1|0|G|365
3CCQ|1|0|U|366
3CCQ|1|0|G|367
3CCQ|1|0|C|368
3CCQ|1|0|G|369

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain M

50S ribosomal protein L15e