IL_3CCQ_104
3D structure
- PDB id
- 3CCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 3CCQ|1|9|U|87
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CCQ_104 not in the Motif Atlas
- Homologous match to IL_4V9F_107
- Geometric discrepancy: 0.0601
- The information below is about IL_4V9F_107
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
3CCQ|1|9|G|86
3CCQ|1|9|U|87
3CCQ|1|9|G|88
*
3CCQ|1|9|C|95
3CCQ|1|9|C|96
Current chains
- Chain 9
- 5S RIBOSOMAL RNA
Nearby chains
- Chain 0
- Large subunit ribosomal RNA; LSU rRNA
- Chain H
- 50S ribosomal protein L10e
- Chain W
- 50S ribosomal protein L30P
Coloring options: