IL_3CCS_011

3D structure

PDB id

3CCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CUCUCAUC*GUGCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCS_011 not in the Motif Atlas

Homologous match to IL_4V9F_011

Geometric discrepancy: 0.4579

The information below is about IL_4V9F_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

3CCS|1|0|C|280
3CCS|1|0|U|281
3CCS|1|0|C|282
3CCS|1|0|U|283
3CCS|1|0|C|284
3CCS|1|0|A|285
3CCS|1|0|U|286
3CCS|1|0|C|287
*
3CCS|1|0|G|365
3CCS|1|0|U|366
3CCS|1|0|G|367
3CCS|1|0|C|368
3CCS|1|0|G|369

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain M

50S ribosomal protein L15e