IL_3CCV_107

3D structure

PDB id

3CCV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGUGA*UACCC

Length

10 nucleotides

Bulged bases

3CCV|1|0|G|1165

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCV_107 not in the Motif Atlas

Geometric match to IL_5J7L_384

Geometric discrepancy: 0.2581

The information below is about IL_5J7L_384

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33835.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

3CCV|1|0|G|1162
3CCV|1|0|G|1163
3CCV|1|0|U|1164
3CCV|1|0|G|1165
3CCV|1|0|A|1166
*
3CCV|1|0|U|1180
3CCV|1|0|A|1181
3CCV|1|0|C|1182
3CCV|1|0|C|1183
3CCV|1|0|C|1184

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain I

50S ribosomal protein L11P