IL_3CCV_108

3D structure

PDB id

3CCV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGAAUUCGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CCV_108 not in the Motif Atlas

Homologous match to IL_4V9F_111

Geometric discrepancy: 0.0377

The information below is about IL_4V9F_111

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80252.1

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

10

Unit IDs

3CCV|1|0|G|1744
3CCV|1|0|G|1745
3CCV|1|0|A|1746
3CCV|1|0|A|1747
3CCV|1|0|U|1748
3CCV|1|0|U|1749
3CCV|1|0|C|1750
3CCV|1|0|G|1751
3CCV|1|0|G|1752
*
3CCV|1|0|C|2031
3CCV|1|0|U|2032
3CCV|1|0|G|2033
3CCV|1|0|U|2034
3CCV|1|0|C|2035

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain K

50S ribosomal protein L14P