IL_3CD6_030
3D structure
- PDB id
- 3CD6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- GGG*CCAUC
- Length
- 8 nucleotides
- Bulged bases
- 3CD6|1|0|G|869, 3CD6|1|0|C|881, 3CD6|1|0|A|882
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CD6_030 not in the Motif Atlas
- Geometric match to IL_4V9F_030
- Geometric discrepancy: 0.035
- The information below is about IL_4V9F_030
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_57881.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
3CD6|1|0|G|868
3CD6|1|0|G|869
3CD6|1|0|G|870
*
3CD6|1|0|C|880
3CD6|1|0|C|881
3CD6|1|0|A|882
3CD6|1|0|U|883
3CD6|1|0|C|884
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L37e
- Chain A
- 50S ribosomal protein L2P
- Chain M
- 50S ribosomal protein L15e
- Chain R
- 50S ribosomal protein L22P
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