IL_3CME_061
3D structure
- PDB id
- 3CME (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- AUUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 3CME|1|0|G|2033
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CME_061 not in the Motif Atlas
- Homologous match to IL_4V9F_062
- Geometric discrepancy: 0.0667
- The information below is about IL_4V9F_062
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
3CME|1|0|A|1747
3CME|1|0|U|1748
3CME|1|0|U|1749
3CME|1|0|C|1750
3CME|1|0|G|1751
3CME|1|0|G|1752
*
3CME|1|0|C|2031
3CME|1|0|U|2032
3CME|1|0|G|2033
3CME|1|0|U|2034
Current chains
- Chain 0
- 50S RIBOSOMAL RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3P
- Chain K
- 50S ribosomal protein L14P
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