IL_3CPW_101

3D structure

PDB id

3CPW (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGUUGCCU*AUAAGC

Length

14 nucleotides

Bulged bases

3CPW|1|9|U|3023, 3CPW|1|9|G|3025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CPW|1|9|G|3021
3CPW|1|9|G|3022
3CPW|1|9|U|3023
3CPW|1|9|U|3024
3CPW|1|9|G|3025
3CPW|1|9|C|3026
3CPW|1|9|C|3027
3CPW|1|9|U|3028
*
3CPW|1|9|A|3054
3CPW|1|9|U|3055
3CPW|1|9|A|3056
3CPW|1|9|A|3057
3CPW|1|9|G|3058
3CPW|1|9|C|3059

Current chains

Chain 9

5S RIBOSOMAL RNA

Nearby chains

Chain D

50S ribosomal protein L5P

Chain M

50S ribosomal protein L18P