IL_3CXC_025
3D structure
- PDB id
- 3CXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAAUC*GCAACAGC
- Length
- 13 nucleotides
- Bulged bases
- 3CXC|1|0|A|894, 3CXC|1|0|G|898
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3CXC_025 not in the Motif Atlas
- Geometric match to IL_4V9F_024
- Geometric discrepancy: 0.0337
- The information below is about IL_4V9F_024
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
3CXC|1|0|G|765
3CXC|1|0|A|766
3CXC|1|0|A|767
3CXC|1|0|U|768
3CXC|1|0|C|769
*
3CXC|1|0|G|892
3CXC|1|0|C|893
3CXC|1|0|A|894
3CXC|1|0|A|895
3CXC|1|0|C|896
3CXC|1|0|A|897
3CXC|1|0|G|898
3CXC|1|0|C|899
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain C
- RIBOSOMAL PROTEIN L4
- Chain K
- RIBOSOMAL PROTEIN L15
- Chain L
- RIBOSOMAL PROTEIN L15E
- Chain Z
- RIBOSOMAL PROTEIN L37E
Coloring options: