IL_3CXC_072

3D structure

PDB id

3CXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGG*UAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3CXC_072 not in the Motif Atlas

Homologous match to IL_4V9F_072

Geometric discrepancy: 0.0355

The information below is about IL_4V9F_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75527.2

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

10

Unit IDs

3CXC|1|0|G|2090
3CXC|1|0|G|2091
3CXC|1|0|G|2092
3CXC|1|0|G|2093
*
3CXC|1|0|U|2652
3CXC|1|0|A|2653
3CXC|1|0|C|2654

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

RIBOSOMAL PROTEIN L3

Chain I

RIBOSOMAL PROTEIN L13

Chain Q

RIBOSOMAL PROTEIN L22