IL_3CXC_101

3D structure

PDB id

3CXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGUUGCCU*AUAAGC

Length

14 nucleotides

Bulged bases

3CXC|1|9|U|3023, 3CXC|1|9|G|3025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CXC|1|9|G|3021
3CXC|1|9|G|3022
3CXC|1|9|U|3023
3CXC|1|9|U|3024
3CXC|1|9|G|3025
3CXC|1|9|C|3026
3CXC|1|9|C|3027
3CXC|1|9|U|3028
*
3CXC|1|9|A|3054
3CXC|1|9|U|3055
3CXC|1|9|A|3056
3CXC|1|9|A|3057
3CXC|1|9|G|3058
3CXC|1|9|C|3059

Current chains

Chain 9

5S RIBOSOMAL RNA

Nearby chains

Chain D

RIBOSOMAL PROTEIN L5

Chain M

RIBOSOMAL PROTEIN L18