IL_3DVZ_001

3D structure

PDB id

3DVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Sarcin/Ricin Domain from E. coli 23 S rRNA

Experimental method

X-RAY DIFFRACTION

Resolution

1 Å

Loop

Sequence

CUAGUAC*GGACCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49493.8

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

18

Unit IDs

3DVZ|1|A|C|2652
3DVZ|1|A|U|2653
3DVZ|1|A|A|2654
3DVZ|1|A|G|2655
3DVZ|1|A|U|2656
3DVZ|1|A|A|2657
3DVZ|1|A|C|2658
*
3DVZ|1|A|G|2663
3DVZ|1|A|G|2664
3DVZ|1|A|A|2665
3DVZ|1|A|C|2666
3DVZ|1|A|C|2667
3DVZ|1|A|G|2668

Current chains

Chain A

Sarcin/Ricin Domain from E. Coli 23 S rRNA

Nearby chains