IL_3E3J_002
3D structure
- PDB id
- 3E3J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of an Intermediate Complex of T7 RNAP and 8nt of RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6.7 Å
Loop
- Sequence
- GAC*GTC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3E3J|1|N|DG|107
3E3J|1|N|DA|108
3E3J|1|N|DC|109
*
3E3J|1|T|DG|24
3E3J|1|T|DT|25
3E3J|1|T|DC|26
Current chains
- Chain N
- DNA (5'-D(*DTP*DAP*DAP*DTP*DAP*DCP*DGP*DAP*DCP*DTP*DCP*DAP*DCP*DTP*DAP*DTP*DAP*DTP*DTP*DTP*DCP*DTP*DGP*DCP*DCP*DAP*DAP*DAP*DCP*DGP*DGP*DC)-3')
- Chain T
- DNA (28-MER)
Nearby chains
- Chain C
- DNA-directed RNA polymerase
Coloring options: