IL_3EGZ_001
3D structure
- PDB id
- 3EGZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an in vitro evolved tetracycline aptamer and artificial riboswitch
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.2 Å
Loop
- Sequence
- GAG*CUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: GAG,CUC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3EGZ_001 not in the Motif Atlas
- Geometric match to IL_5TBW_110
- Geometric discrepancy: 0.1212
- The information below is about IL_5TBW_110
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
3EGZ|1|B|G|1
3EGZ|1|B|A|2
3EGZ|1|B|G|3
*
3EGZ|1|B|C|63
3EGZ|1|B|U|64
3EGZ|1|B|C|65
Current chains
- Chain B
- Tetracycline aptamer and artificial riboswitch
Nearby chains
No other chains within 10ÅColoring options: